SAR86 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The SAR86 cluster bacterium is characterized by its possession of two replicons, which are essential for its genetic and metabolic functions. The specific genomic data for this organism can be found under the accessions NVWI00000000.1 and NVVJ00000000.1. The SAR86 cluster is known to thrive in marine environments, particularly in oceanic waters, where it plays a significant role in the microbial community. Members of this cluster are often associated with the degradation of organic matter, contributing to nutrient cycling in aquatic ecosystems. Their metabolic capabilities are likely adapted to the oligotrophic conditions typical of open ocean waters, where they may utilize a variety of substrates. Understanding the genomic features of the SAR86 cluster bacterium, including its two replicons, can provide insights into its evolutionary adaptations and ecological functions. The presence of multiple replicons may suggest a complex regulatory mechanism that allows for efficient adaptation to fluctuating environmental conditions. This adaptability is critical for survival in the diverse and often challenging marine habitats where these bacteria are found. In summary, the SAR86 cluster bacterium exemplifies the intricate relationships within marine microbial communities and highlights the importance of microbial processes in oceanic nutrient cycling. Its genomic characteristics facilitate its role in these ecosystems, making it a key player in maintaining the health and balance of marine environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR86 cluster bacterium isolate NORP41

Gene Summary

Adenine Count

904582 bp

Thymine Count

897491 bp

Guanine Count

652427 bp

Cytosine Count

672138 bp

Genome Length

3128113 bp

Protein-coding Genes

2864 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-basal body complex protein flieCOA71_09630Not AvailableNegative2039710 - 204002111618.8
sigma-54-dependent fis family transcriptional regulatorCOA71_09635Not AvailableNegative2040054 - 204140650125.9
hypothetical proteinCOA71_09640Not AvailableNegative2041436 - 204264444173.0
sigma-54-dependent fis family transcriptional regulatorCOA71_09645Not AvailableNegative2043119 - 204451052459.3
hypothetical proteinCOA71_09650Not AvailableNegative2044980 - 204654859201.3
hypothetical proteinCOA71_09655Not AvailableNegative2046616 - 204763238216.4
hypothetical proteinCOA71_09660Not AvailableNegative2047746 - 204935960200.0
flagellar motor protein pomaCOA71_09665Not AvailablePositive2049842 - 205064828891.1
type vi secretion system protein tsslCOA71_09670Not AvailablePositive2050673 - 205153631379.7
electron transport complex subunit rsxeCOA71_09675Not AvailableNegative2051862 - 205254524049.3

Displaying genes 1891 – 1900 of 6560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.