SAR86 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The SAR86 cluster bacterium is characterized by its possession of two replicons, which are essential for its genetic and metabolic functions. The specific genomic data for this organism can be found under the accessions NVWI00000000.1 and NVVJ00000000.1. The SAR86 cluster is known to thrive in marine environments, particularly in oceanic waters, where it plays a significant role in the microbial community. Members of this cluster are often associated with the degradation of organic matter, contributing to nutrient cycling in aquatic ecosystems. Their metabolic capabilities are likely adapted to the oligotrophic conditions typical of open ocean waters, where they may utilize a variety of substrates. Understanding the genomic features of the SAR86 cluster bacterium, including its two replicons, can provide insights into its evolutionary adaptations and ecological functions. The presence of multiple replicons may suggest a complex regulatory mechanism that allows for efficient adaptation to fluctuating environmental conditions. This adaptability is critical for survival in the diverse and often challenging marine habitats where these bacteria are found. In summary, the SAR86 cluster bacterium exemplifies the intricate relationships within marine microbial communities and highlights the importance of microbial processes in oceanic nutrient cycling. Its genomic characteristics facilitate its role in these ecosystems, making it a key player in maintaining the health and balance of marine environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR86 cluster bacterium isolate NORP41

Gene Summary

Adenine Count

904582 bp

Thymine Count

897491 bp

Guanine Count

652427 bp

Cytosine Count

672138 bp

Genome Length

3128113 bp

Protein-coding Genes

2864 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseCOA71_08860Not AvailableNegative1882217 - 188333840196.7
hypothetical proteinCOA71_08865Not AvailableNegative1883331 - 188381317847.9
type iv pilus biogenesis/stability protein pilwCOA71_08870Not AvailableNegative1883806 - 188460630114.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCOA71_08875Not AvailableNegative1884630 - 188577242073.8
nucleoside-diphosphate kinaseCOA71_08880Not AvailableNegative1885810 - 188624115432.3
ggdef domain-containing proteinCOA71_08885Not AvailableNegative1886637 - 188844867729.7
alpha/beta hydrolaseCOA71_08890Not AvailableNegative1888758 - 188947426177.0
fe-s assembly protein iscxCOA71_08895Not AvailableNegative1889693 - 18898847477.76
isc system 2fe-2s type ferredoxinCOA71_08900Not AvailableNegative1889962 - 189030012407.6
fe-s protein assembly chaperone hscaCOA71_08905Not AvailableNegative1890300 - 189218067841.3

Displaying genes 1741 – 1750 of 6560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.