SAR86 cluster bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The SAR86 cluster bacterium is characterized by its possession of two replicons, which are essential for its genetic and metabolic functions. The specific genomic data for this organism can be found under the accessions NVWI00000000.1 and NVVJ00000000.1. The SAR86 cluster is known to thrive in marine environments, particularly in oceanic waters, where it plays a significant role in the microbial community. Members of this cluster are often associated with the degradation of organic matter, contributing to nutrient cycling in aquatic ecosystems. Their metabolic capabilities are likely adapted to the oligotrophic conditions typical of open ocean waters, where they may utilize a variety of substrates. Understanding the genomic features of the SAR86 cluster bacterium, including its two replicons, can provide insights into its evolutionary adaptations and ecological functions. The presence of multiple replicons may suggest a complex regulatory mechanism that allows for efficient adaptation to fluctuating environmental conditions. This adaptability is critical for survival in the diverse and often challenging marine habitats where these bacteria are found. In summary, the SAR86 cluster bacterium exemplifies the intricate relationships within marine microbial communities and highlights the importance of microbial processes in oceanic nutrient cycling. Its genomic characteristics facilitate its role in these ecosystems, making it a key player in maintaining the health and balance of marine environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: SAR86 cluster bacterium isolate NORP41

Gene Summary

Adenine Count

904582 bp

Thymine Count

897491 bp

Guanine Count

652427 bp

Cytosine Count

672138 bp

Genome Length

3128113 bp

Protein-coding Genes

2864 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease adapter clpsCOA71_06305Not AvailableNegative1308619 - 130900814286.4
cold shock domain protein cspdCOA71_06310Not AvailablePositive1309281 - 130967914230.0
pseudouridine synthaseCOA71_06315Not AvailablePositive1309802 - 131035321055.5
bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmcCOA71_06320Not AvailablePositive1310363 - 131238775356.5
m18 family aminopeptidaseCOA71_06325Not AvailableNegative1312384 - 131370048059.2
peptidylprolyl isomeraseCOA71_06330Not AvailableNegative1313730 - 131445225817.7
hypothetical proteinCOA71_06335Not AvailablePositive1314555 - 131506118373.1
pp_01250COA71_06340Not AvailableNegative1315086 - 1315703Not Available
dna recombination protein rmucCOA71_06345Not AvailableNegative1315715 - 131705250170.8
phosphoribosylaminoimidazolesuccinocarboxamide synthaseCOA71_06350Not AvailableNegative1317079 - 131779227049.5

Displaying genes 1241 – 1250 of 6560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.