Stenotrophobium rhamnosiphilum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Stenotrophobium

Description

Stenotrophobium rhamnosiphilum is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that facilitate survival in specific environments. The organism is cataloged under the accession number QANS00000000.1, which provides a reference point for genetic and taxonomic studies. The single replicon trait suggests a potential efficiency in replication and resource utilization, allowing S. rhamnosiphilum to thrive under certain environmental conditions. While specific ecological roles and interactions are not provided, organisms with similar genomic structures often exhibit specialized relationships with their habitats, potentially influencing soil health or plant interactions. Understanding the genomic features of Stenotrophobium rhamnosiphilum contributes to the broader knowledge of microbial diversity and its functional implications in ecosystems. The organism's traits could be significant in studies related to microbiome functionality, plant health, and nutrient cycling within its habitat. Thus, further investigation into its ecological interactions may reveal insights into its role within its specific ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusStenotrophobium
SpeciesStenotrophobium rhamnosiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophobium rhamnosiphilum strain GT1R17 C71, whole genome

Gene Summary

Adenine Count

901095 bp

Thymine Count

905108 bp

Guanine Count

1078479 bp

Cytosine Count

1076585 bp

Genome Length

3961273 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 2-thiouridine(34) synthase mnmaCJD38_04405Not AvailablePositive987462 - 98854139984.2
aconitate hydratase acnaCJD38_04410Not AvailablePositive988750 - 99141395818.8
cobyric acid synthaseCJD38_04415Not AvailablePositive991490 - 99225728445.1
tonb-dependent siderophore receptorCJD38_04420Not AvailablePositive992459 - 99461579251.4
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseCJD38_04425Not AvailablePositive994838 - 99742992887.1
hypothetical proteinCJD38_04430Not AvailablePositive997830 - 99868428150.5
hypothetical proteinCJD38_04435Not AvailableNegative998732 - 99923218623.1
atp-dependent clp protease atp-binding subunit clpxCJD38_04440Not AvailableNegative999364 - 100063846227.8
atp-dependent clp endopeptidase proteolytic subunit clppCJD38_04445Not AvailableNegative1000733 - 100135322797.6
trigger factorCJD38_04450Not AvailableNegative1001427 - 100275247990.6

Displaying genes 881 – 890 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.