Stenotrophobium rhamnosiphilum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Stenotrophobium

Description

Stenotrophobium rhamnosiphilum is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that facilitate survival in specific environments. The organism is cataloged under the accession number QANS00000000.1, which provides a reference point for genetic and taxonomic studies. The single replicon trait suggests a potential efficiency in replication and resource utilization, allowing S. rhamnosiphilum to thrive under certain environmental conditions. While specific ecological roles and interactions are not provided, organisms with similar genomic structures often exhibit specialized relationships with their habitats, potentially influencing soil health or plant interactions. Understanding the genomic features of Stenotrophobium rhamnosiphilum contributes to the broader knowledge of microbial diversity and its functional implications in ecosystems. The organism's traits could be significant in studies related to microbiome functionality, plant health, and nutrient cycling within its habitat. Thus, further investigation into its ecological interactions may reveal insights into its role within its specific ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusStenotrophobium
SpeciesStenotrophobium rhamnosiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophobium rhamnosiphilum strain GT1R17 C71, whole genome

Gene Summary

Adenine Count

901095 bp

Thymine Count

905108 bp

Guanine Count

1078479 bp

Cytosine Count

1076585 bp

Genome Length

3961273 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCJD38_01855Not AvailableNegative395600 - 39695250813.1
damage-inducible protein cinaCJD38_01860Not AvailablePositive397251 - 39773016846.1
rna 2',3'-cyclic phosphodiesteraseCJD38_01865Not AvailablePositive397723 - 39831622679.4
recombinase recaCJD38_01870Not AvailablePositive398443 - 39946536642.5
regulatory protein recxCJD38_01875Not AvailablePositive399503 - 39992515614.2
type vi secretion system baseplate subunit tsseCJD38_01880Not AvailableNegative399997 - 40042516218.6
type vi secretion system atpase tsshCJD38_01885Not AvailableNegative400434 - 40316999402.0
type vi secretion system tube protein hcpCJD38_01890Not AvailableNegative403277 - 40376218287.6
flagellar motor protein motbCJD38_01895Not AvailableNegative403819 - 40549861257.5
type iv secretion protein dotuCJD38_01900Not AvailableNegative405498 - 40616024804.8

Displaying genes 371 – 380 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.