Stenotrophobium rhamnosiphilum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Stenotrophobium

Description

Stenotrophobium rhamnosiphilum is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that facilitate survival in specific environments. The organism is cataloged under the accession number QANS00000000.1, which provides a reference point for genetic and taxonomic studies. The single replicon trait suggests a potential efficiency in replication and resource utilization, allowing S. rhamnosiphilum to thrive under certain environmental conditions. While specific ecological roles and interactions are not provided, organisms with similar genomic structures often exhibit specialized relationships with their habitats, potentially influencing soil health or plant interactions. Understanding the genomic features of Stenotrophobium rhamnosiphilum contributes to the broader knowledge of microbial diversity and its functional implications in ecosystems. The organism's traits could be significant in studies related to microbiome functionality, plant health, and nutrient cycling within its habitat. Thus, further investigation into its ecological interactions may reveal insights into its role within its specific ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusStenotrophobium
SpeciesStenotrophobium rhamnosiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophobium rhamnosiphilum strain GT1R17 C71, whole genome

Gene Summary

Adenine Count

901095 bp

Thymine Count

905108 bp

Guanine Count

1078479 bp

Cytosine Count

1076585 bp

Genome Length

3961273 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2461 domain-containing proteinCJD38_00855Not AvailableNegative173043 - 17378327559.9
class ii aldolaseCJD38_00860Not AvailablePositive173873 - 17464928157.9
sigma-54-dependent fis family transcriptional regulatorCJD38_00865Not AvailableNegative174659 - 17599349154.3
hypothetical proteinCJD38_00870Not AvailableNegative175990 - 17757357676.0
adp-forming succinate--coa ligase subunit betaCJD38_00875Not AvailablePositive178092 - 17925841816.8
succinate--coa ligase subunit alphaCJD38_00880Not AvailablePositive179262 - 18013429728.3
nad+ synthaseCJD38_00885Not AvailablePositive180146 - 18175959189.0
hypothetical proteinCJD38_00890Not AvailableNegative181772 - 18312448879.6
23s rrna pseudouridine(1911/1915/1917) synthase rludCJD38_00895Not AvailablePositive183162 - 18417837429.9
peptidoglycan editing factor pgefCJD38_00900Not AvailablePositive184265 - 18501726398.6

Displaying genes 171 – 180 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.