Zetaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Family

Genus

Description

Zetaproteobacteria is a class of bacteria known for its unique characteristics and ecological significance. This bacterium has a total of six replicons, which suggests a complex genetic structure that may contribute to its adaptability and survival in various environments. The genomic data for Zetaproteobacteria can be accessed through several accession numbers, which include RFFT00000000.1, RFGS00000000.1, RFFX00000000.1, NVWS00000000.2, NVXI00000000.1, and PFGH00000000.1. These accessions represent different genomic sequences that provide insights into the genetic makeup of this bacterium. Zetaproteobacteria is noteworthy for its ecological role, particularly in iron cycling. It is commonly found in environments rich in iron, such as marine habitats where it can influence biogeochemical processes. The ability of these bacteria to oxidize iron compounds suggests they play a crucial role in the formation of iron-rich sediments and contribute to nutrient cycling in their ecosystems. In summary, the unique genetic structure characterized by six replicons and various genomic sequences highlights the complexity of Zetaproteobacteria. Its role in iron cycling indicates its ecological importance, particularly in marine environments where iron availability can significantly impact local biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Zetaproteobacteria bacterium isolate J009 k99_1647817, whole

Gene Summary

Adenine Count

286546 bp

Thymine Count

281903 bp

Guanine Count

617684 bp

Cytosine Count

627092 bp

Genome Length

1813225 bp

Protein-coding Genes

1662 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpaD6682_00050Not AvailableNegative11111 - 1337883684.9
atp-dependent clp protease adapter clpsD6682_00055Not AvailableNegative13520 - 1383111861.4
had family hydrolaseD6682_00060Not AvailablePositive13898 - 1466827694.1
tatd family deoxyribonucleaseD6682_00065Not AvailablePositive14655 - 1542828523.2
nucleotide sugar dehydrogenaseD6682_00070Not AvailablePositive15449 - 1671145639.4
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive15890 - 16267Not Available
nad-dependent epimeraseD6682_00075Not AvailablePositive16716 - 1772637290.4
udp-glucose/gdp-mannose dehydrogenase family proteinD6682_00080Not AvailablePositive17884 - 1920047072.8
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdD6682_00085Not AvailablePositive19211 - 2035941261.8
bola family transcriptional regulatorD6682_00090Not AvailablePositive20356 - 206229846.78

Displaying genes 11 – 20 of 10848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.