Planctomycetota bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Order

Family

Genus

Description

Planctomycetota is a phylum of bacteria that plays a significant role in various ecological niches, particularly within the rhizosphere, the region of soil directly influenced by plant roots. The rhizosphere is a dynamic environment where complex interactions occur between plants, soil, and microorganisms, contributing to nutrient cycling and plant health. A notable characteristic of Planctomycetota is that it possesses five replicons. Replicons are DNA molecules that can replicate independently within a cell, which may indicate a level of genetic complexity and adaptability. This trait could be essential for the bacterium's survival and function in the diverse conditions present in the rhizosphere. The genomic data for Planctomycetota is represented by several accessions: PAIH00000000.1, NVWA00000000.1, QQVJ00000000.1, QEVJ00000000.1, and RFHU00000000.1. These accessions provide a basis for further research into the genetic makeup and functional capabilities of this bacterium. In summary, the presence of Planctomycetota within the rhizosphere highlights its potential importance in soil health and plant interactions. The ability to maintain multiple replicons may contribute to its adaptability and functional diversity, making it a noteworthy organism for studies on microbial ecology and soil microbiomes. Understanding the role of Planctomycetota in the rhizosphere could provide insights into sustainable agricultural practices and the management of soil ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Planctomycetota bacterium isolate J058 k99_1671252, whole

Gene Summary

Adenine Count

926334 bp

Thymine Count

913910 bp

Guanine Count

2363699 bp

Cytosine Count

2408680 bp

Genome Length

6612623 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD6731_13990Not AvailablePositive3515097 - 351593030984.1
6-phosphofructokinaseD6731_14000Not AvailablePositive3518533 - 351975644555.4
exonucleaseD6731_14005Not AvailablePositive3520079 - 352081627380.0
trab/gumn family proteinD6731_14010Not AvailableNegative3521196 - 352212834650.2
3'-5' exonucleaseD6731_14015Not AvailableNegative3522330 - 352307626741.8
class i sam-dependent methyltransferaseD6731_14020Not AvailableNegative3523102 - 352368921996.3
sigma-54-dependent fis family transcriptional regulatorD6731_14025Not AvailableNegative3523741 - 352511450277.3
lipopolysaccharide heptosyltransferase family proteinD6731_14030Not AvailablePositive3525109 - 352643746755.8
hypothetical proteinD6731_14035Not AvailablePositive3526437 - 352697918964.5
radical sam proteinD6731_14040Not AvailablePositive3526990 - 352765824516.6

Displaying genes 2741 – 2750 of 24059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.