Planctomycetota bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Order

Family

Genus

Description

Planctomycetota is a phylum of bacteria that plays a significant role in various ecological niches, particularly within the rhizosphere, the region of soil directly influenced by plant roots. The rhizosphere is a dynamic environment where complex interactions occur between plants, soil, and microorganisms, contributing to nutrient cycling and plant health. A notable characteristic of Planctomycetota is that it possesses five replicons. Replicons are DNA molecules that can replicate independently within a cell, which may indicate a level of genetic complexity and adaptability. This trait could be essential for the bacterium's survival and function in the diverse conditions present in the rhizosphere. The genomic data for Planctomycetota is represented by several accessions: PAIH00000000.1, NVWA00000000.1, QQVJ00000000.1, QEVJ00000000.1, and RFHU00000000.1. These accessions provide a basis for further research into the genetic makeup and functional capabilities of this bacterium. In summary, the presence of Planctomycetota within the rhizosphere highlights its potential importance in soil health and plant interactions. The ability to maintain multiple replicons may contribute to its adaptability and functional diversity, making it a noteworthy organism for studies on microbial ecology and soil microbiomes. Understanding the role of Planctomycetota in the rhizosphere could provide insights into sustainable agricultural practices and the management of soil ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Planctomycetota bacterium isolate J058 k99_1671252, whole

Gene Summary

Adenine Count

926334 bp

Thymine Count

913910 bp

Guanine Count

2363699 bp

Cytosine Count

2408680 bp

Genome Length

6612623 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine protein kinaseD6731_13940Not AvailableNegative3502942 - 3506361124654.0
hypothetical proteinD6731_13945Not AvailableNegative3506304 - 350754244376.2
hypothetical proteinD6731_13950Not AvailableNegative3507539 - 350885846950.9
gtp cyclohydrolase i foleD6731_13955Not AvailablePositive3509010 - 350958221119.7
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaD6731_13960Not AvailablePositive3509735 - 351083840777.5
2-oxo acid dehydrogenase subunit e2D6731_13965Not AvailablePositive3510850 - 351220247870.4
3-methyl-2-oxobutanoate dehydrogenaseD6731_13970Not AvailablePositive3512206 - 351333941293.9
lipoyl(octanoyl) transferase lipbD6731_13975Not AvailablePositive3513129 - 351407633494.4
sigma-70 family rna polymerase sigma factorD6731_13980Not AvailablePositive3514187 - 351471419553.5
hypothetical proteinD6731_13985Not AvailablePositive3514711 - 351510014253.4

Displaying genes 2731 – 2740 of 24059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.