Planctomycetota bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Order

Family

Genus

Description

Planctomycetota is a phylum of bacteria that plays a significant role in various ecological niches, particularly within the rhizosphere, the region of soil directly influenced by plant roots. The rhizosphere is a dynamic environment where complex interactions occur between plants, soil, and microorganisms, contributing to nutrient cycling and plant health. A notable characteristic of Planctomycetota is that it possesses five replicons. Replicons are DNA molecules that can replicate independently within a cell, which may indicate a level of genetic complexity and adaptability. This trait could be essential for the bacterium's survival and function in the diverse conditions present in the rhizosphere. The genomic data for Planctomycetota is represented by several accessions: PAIH00000000.1, NVWA00000000.1, QQVJ00000000.1, QEVJ00000000.1, and RFHU00000000.1. These accessions provide a basis for further research into the genetic makeup and functional capabilities of this bacterium. In summary, the presence of Planctomycetota within the rhizosphere highlights its potential importance in soil health and plant interactions. The ability to maintain multiple replicons may contribute to its adaptability and functional diversity, making it a noteworthy organism for studies on microbial ecology and soil microbiomes. Understanding the role of Planctomycetota in the rhizosphere could provide insights into sustainable agricultural practices and the management of soil ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Planctomycetota bacterium isolate J058 k99_1671252, whole

Gene Summary

Adenine Count

926334 bp

Thymine Count

913910 bp

Guanine Count

2363699 bp

Cytosine Count

2408680 bp

Genome Length

6612623 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fic family proteinD6731_06445Not AvailableNegative1621973 - 162260824042.0
hypothetical proteinD6731_06450Not AvailablePositive1622771 - 16230018947.73
hypothetical proteinD6731_06455Not AvailableNegative1623041 - 162349015538.3
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabD6731_06460Not AvailablePositive1623953 - 162533551718.8
hypothetical proteinD6731_06465Not AvailablePositive1625527 - 16257157082.63
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdD6731_06470Not AvailablePositive1625879 - 162696138107.9
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeD6731_06475Not AvailablePositive1627086 - 162828543558.6
serine/threonine protein kinaseD6731_06480Not AvailableNegative1628296 - 162943841487.8
duf4388 domain-containing proteinD6731_06485Not AvailablePositive1629708 - 1632791113451.0
glucose-1-phosphate thymidylyltransferaseD6731_06490Not AvailableNegative1632834 - 163372132098.7

Displaying genes 1261 – 1270 of 24059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.