Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 1158462 - 1158536 | Not Available |
| zinc carboxypeptidase | EHT25_04860 | Not Available | Positive | 1158726 - 1161302 | 96830.7 |
| t9ss c-terminal target domain-containing protein | EHT25_04865 | Not Available | Negative | 1161434 - 1164280 | 99137.3 |
| hypothetical protein | EHT25_04870 | Not Available | Negative | 1164674 - 1167391 | 95628.7 |
| response regulator | EHT25_04875 | Not Available | Negative | 1167648 - 1171652 | 152827.0 |
| hydrolase | EHT25_04880 | Not Available | Positive | 1171757 - 1173967 | 84523.9 |
| hypothetical protein | EHT25_04885 | Not Available | Positive | 1174034 - 1174222 | 6560.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EHT25_04890 | Not Available | Negative | 1174329 - 1175225 | 32335.2 |
| nad-dependent dna ligase liga | EHT25_04895 | Not Available | Negative | 1175313 - 1177358 | 76041.8 |
| ribulose-phosphate 3-epimerase | EHT25_04900 | Not Available | Positive | 1177542 - 1178234 | 24986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
