Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1460 domain-containing protein | EHT25_04600 | Not Available | Negative | 1097775 - 1098671 | 33356.2 |
| alpha-amylase | EHT25_04605 | Not Available | Negative | 1098768 - 1100639 | 70913.8 |
| alpha-amylase | EHT25_04610 | Not Available | Positive | 1100779 - 1102656 | 71192.4 |
| beta-phosphoglucomutase | EHT25_04615 | Not Available | Positive | 1102746 - 1103411 | 24035.1 |
| dinb family protein | EHT25_04620 | Not Available | Positive | 1103413 - 1103985 | 22160.0 |
| glycoside hydrolase family 65 protein | EHT25_04625 | Not Available | Positive | 1104063 - 1106390 | 90041.1 |
| hypothetical protein | EHT25_04630 | Not Available | Negative | 1106717 - 1106950 | 8216.2 |
| arsenic transporter | EHT25_04635 | Not Available | Negative | 1107053 - 1108312 | 44500.5 |
| endo-1,4-beta-xylanase | EHT25_04640 | Not Available | Negative | 1108833 - 1109894 | 41373.1 |
| alpha-n-arabinofuranosidase | EHT25_04645 | Not Available | Negative | 1109919 - 1110971 | 39493.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
