Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent metal cation transporter | EHT25_04400 | Not Available | Negative | 1045926 - 1047080 | 40386.3 |
| 5-oxoprolinase | EHT25_04405 | Not Available | Negative | 1047222 - 1050968 | 134914.0 |
| pig-l family deacetylase | EHT25_04410 | Not Available | Negative | 1051070 - 1053592 | 92999.3 |
| sodium-translocating pyrophosphatase | EHT25_04415 | Not Available | Positive | 1053817 - 1056501 | 94103.1 |
| 50s ribosomal protein l25/general stress protein ctc | EHT25_04420 | Not Available | Negative | 1056654 - 1057217 | 20572.1 |
| ribose-phosphate pyrophosphokinase | EHT25_04425 | Not Available | Negative | 1057329 - 1058270 | 33955.0 |
| phosphatase pap2 family protein | EHT25_04430 | Not Available | Negative | 1058392 - 1058892 | 18637.4 |
| tryptophan--trna ligase | EHT25_04435 | Not Available | Negative | 1059074 - 1060048 | 36727.1 |
| duf2461 domain-containing protein | EHT25_04440 | Not Available | Positive | 1060201 - 1060911 | 27340.3 |
| duf4332 domain-containing protein | EHT25_04445 | Not Available | Negative | 1060986 - 1061393 | 14431.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
