Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | EHT25_04050 | Not Available | Positive | 957413 - 958411 | 37463.4 |
| sugar phosphate isomerase/epimerase | EHT25_04055 | Not Available | Positive | 958643 - 959578 | 34496.5 |
| gtp cyclohydrolase i fole | EHT25_04060 | Not Available | Negative | 959654 - 960388 | 27327.6 |
| 6-carboxytetrahydropterin synthase | EHT25_04065 | Not Available | Negative | 960351 - 960767 | 16077.0 |
| gfo/idh/moca family oxidoreductase | EHT25_04070 | Not Available | Positive | 961106 - 962464 | 50527.3 |
| glucose/galactose mfs transporter | EHT25_04075 | Not Available | Positive | 962579 - 963811 | 43952.8 |
| ghmp kinase | EHT25_04080 | Not Available | Positive | 963811 - 964887 | 39470.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EHT25_04085 | Not Available | Positive | 965037 - 967055 | 74721.8 |
| hypothetical protein | EHT25_04090 | Not Available | Positive | 967143 - 967337 | 7677.88 |
| mmcq/yjbr family dna-binding protein | EHT25_04095 | Not Available | Positive | 967334 - 967687 | 13397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
