Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_04000 | Not Available | Positive | 945587 - 946213 | 23817.6 |
| response regulator | EHT25_04005 | Not Available | Negative | 946249 - 950430 | 157199.0 |
| sos response-associated peptidase | EHT25_04010 | Not Available | Positive | 950661 - 951287 | 24082.2 |
| deoxynucleoside kinase | EHT25_04015 | Not Available | Negative | 951350 - 951955 | 23350.9 |
| rhodanese-related sulfurtransferase | EHT25_04020 | Not Available | Positive | 952052 - 953008 | 36066.8 |
| gnat family n-acetyltransferase | EHT25_04025 | Not Available | Negative | 952994 - 953500 | 19571.5 |
| 5'/3'-nucleotidase sure | EHT25_04030 | Not Available | Positive | 953636 - 954469 | 30464.0 |
| gh3 auxin-responsive promoter | EHT25_04035 | Not Available | Positive | 954483 - 956075 | 60813.2 |
| lyse family translocator | EHT25_04040 | Not Available | Negative | 956148 - 956786 | 23645.6 |
| nudix hydrolase | EHT25_04045 | Not Available | Negative | 956794 - 957342 | 20637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
