Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EHT25_03850 | Not Available | Negative | 915415 - 917154 | 65308.6 |
| sigma-70 family rna polymerase sigma factor | EHT25_03855 | Not Available | Negative | 917306 - 918169 | 32666.1 |
| polyribonucleotide nucleotidyltransferase | EHT25_03860 | Not Available | Negative | 918287 - 920428 | 78039.8 |
| 30s ribosomal protein s15 | EHT25_03865 | Not Available | Negative | 920626 - 920901 | 10660.0 |
| yjgp/yjgq family permease | EHT25_03870 | Not Available | Negative | 920992 - 922509 | 57560.4 |
| atpase | EHT25_03875 | Not Available | Negative | 922515 - 922910 | 15343.8 |
| Trna-met | Not Available | Not Available | Positive | 923022 - 923098 | Not Available |
| dna polymerase iii subunit delta | EHT25_03885 | Not Available | Negative | 923254 - 924273 | 38401.9 |
| duf479 domain-containing protein | EHT25_03890 | Not Available | Negative | 924316 - 924921 | 23401.9 |
| cytidine deaminase | EHT25_03895 | Not Available | Negative | 924934 - 925434 | 18058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
