Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | EHT25_03800 | Not Available | Positive | 902055 - 903044 | 34980.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EHT25_03805 | Not Available | Negative | 903076 - 903738 | 25659.8 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | EHT25_03810 | Not Available | Negative | 903735 - 905060 | 48180.8 |
| hypothetical protein | EHT25_03815 | Not Available | Negative | 905067 - 906002 | 33180.3 |
| spor domain-containing protein | EHT25_03820 | Not Available | Negative | 906168 - 907277 | 40525.1 |
| tonb-dependent receptor | EHT25_03825 | Not Available | Negative | 907298 - 908965 | 62602.3 |
| outer membrane protein assembly factor bamd | EHT25_03830 | Not Available | Negative | 909075 - 912110 | 114279.0 |
| m61 family peptidase | EHT25_03835 | Not Available | Positive | 912217 - 914070 | 69531.3 |
| hypothetical protein | EHT25_03840 | Not Available | Negative | 914072 - 914317 | 9836.81 |
| tetratricopeptide repeat protein | EHT25_03845 | Not Available | Positive | 914372 - 915418 | 39470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
