Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | EHT25_03750 | Not Available | Positive | 886365 - 886685 | 12030.6 |
| hybrid sensor histidine kinase/response regulator | EHT25_03755 | Not Available | Negative | 886813 - 887916 | 41137.4 |
| pas domain s-box protein | EHT25_03760 | Not Available | Negative | 888134 - 891370 | 121756.0 |
| hybrid sensor histidine kinase/response regulator | EHT25_03765 | Not Available | Negative | 891424 - 892506 | 40335.8 |
| diphthine--ammonia ligase | EHT25_03770 | Not Available | Negative | 893198 - 893893 | 26172.4 |
| duf5074 domain-containing protein | EHT25_03775 | Not Available | Negative | 893943 - 895052 | 39648.7 |
| tonb-dependent receptor | EHT25_03780 | Not Available | Negative | 895049 - 896968 | 72665.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EHT25_03785 | Not Available | Positive | 897440 - 899596 | 78608.3 |
| xre family transcriptional regulator | EHT25_03790 | Not Available | Negative | 899610 - 900017 | 15641.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EHT25_03795 | Not Available | Negative | 900200 - 901018 | 29187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
