Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | EHT25_03600 | Not Available | Positive | 842427 - 843068 | 24550.8 |
| rhomboid family intramembrane serine protease | EHT25_03605 | Not Available | Negative | 843140 - 843748 | 23054.3 |
| duf2167 domain-containing protein | EHT25_03610 | Not Available | Negative | 843763 - 844707 | 34945.8 |
| bacillithiol biosynthesis deacetylase bshb1 | EHT25_03615 | Not Available | Negative | 844964 - 845698 | 27646.0 |
| lysm peptidoglycan-binding domain-containing protein | EHT25_03620 | Not Available | Negative | 845775 - 846848 | 40391.5 |
| thioredoxin-disulfide reductase | EHT25_03625 | Not Available | Negative | 846963 - 847916 | 34187.8 |
| restriction endonuclease | EHT25_03630 | Not Available | Negative | 848243 - 849337 | 41943.4 |
| nipsnap family containing protein | EHT25_03635 | Not Available | Positive | 849521 - 850315 | 29918.8 |
| hypothetical protein | EHT25_03640 | Not Available | Negative | 850320 - 850505 | 7063.88 |
| hypothetical protein | EHT25_03645 | Not Available | Positive | 850723 - 851151 | 16444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
