Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | EHT25_32355 | Not Available | Positive | 8138952 - 8140034 | 40946.9 |
| susc/raga family tonb-linked outer membrane protein | EHT25_32360 | Not Available | Positive | 8140067 - 8143600 | 127239.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_32365 | Not Available | Positive | 8143697 - 8145166 | 55473.0 |
| lanthionine synthetase | EHT25_32370 | Not Available | Negative | 8145408 - 8146613 | 45065.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT25_32375 | Not Available | Negative | 8146630 - 8147901 | 48032.6 |
| peptidase domain-containing abc transporter | EHT25_32380 | Not Available | Negative | 8147905 - 8150139 | 85565.4 |
| hypothetical protein | EHT25_32385 | Not Available | Negative | 8150151 - 8153333 | 121152.0 |
| llm class flavin-dependent oxidoreductase | EHT25_32390 | Not Available | Negative | 8154169 - 8155107 | 34858.8 |
| sialate o-acetylesterase | EHT25_32395 | Not Available | Negative | 8155663 - 8157579 | 70694.0 |
| hypothetical protein | EHT25_32400 | Not Available | Positive | 8157714 - 8157968 | 9908.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
