Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EHT25_32105 | Not Available | Negative | 8073435 - 8074325 | 33994.8 |
| duf4230 domain-containing protein | EHT25_32110 | Not Available | Positive | 8074431 - 8075114 | 26383.8 |
| m1 family peptidase | EHT25_32115 | Not Available | Positive | 8075118 - 8077136 | 75314.3 |
| hypothetical protein | EHT25_32120 | Not Available | Negative | 8077173 - 8078627 | 54955.3 |
| duf814 domain-containing protein | EHT25_32125 | Not Available | Negative | 8078630 - 8080231 | 61824.4 |
| hypothetical protein | EHT25_32130 | Not Available | Positive | 8080305 - 8080508 | 7244.06 |
| n-acyl-d-glucosamine 2-epimerase | EHT25_32135 | Not Available | Positive | 8080645 - 8081829 | 46231.7 |
| mbl fold metallo-hydrolase | EHT25_32140 | Not Available | Negative | 8081921 - 8082682 | 29072.2 |
| response regulator | EHT25_32145 | Not Available | Negative | 8082762 - 8083139 | 14116.1 |
| hypothetical protein | EHT25_32150 | Not Available | Positive | 8083520 - 8083960 | 16928.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
