Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT25_31900 | Not Available | Positive | 8023280 - 8024722 | 52623.4 |
| hypothetical protein | EHT25_31905 | Not Available | Positive | 8024865 - 8026154 | 49116.1 |
| duf2237 domain-containing protein | EHT25_31910 | Not Available | Negative | 8026243 - 8026608 | 13874.6 |
| endonuclease/exonuclease/phosphatase family protein | EHT25_31915 | Not Available | Negative | 8026640 - 8027482 | 32044.2 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_31920 | Not Available | Negative | 8027629 - 8029401 | 66620.7 |
| tonb-dependent receptor | EHT25_31925 | Not Available | Negative | 8029421 - 8032591 | 117073.0 |
| duf4974 domain-containing protein | EHT25_31930 | Not Available | Negative | 8033070 - 8034068 | 37273.9 |
| rna polymerase sigma-70 factor | EHT25_31935 | Not Available | Negative | 8034114 - 8034785 | 26130.2 |
| d-tyrosyl-trna(tyr) deacylase | EHT25_31940 | Not Available | Negative | 8035209 - 8035661 | 16401.0 |
| magnesium transporter | EHT25_31945 | Not Available | Negative | 8035756 - 8037108 | 49139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
