Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | EHT25_31850 | Not Available | Positive | 8006629 - 8007294 | 25074.7 |
| 2-oxoglutarate dehydrogenase e1 component | EHT25_31855 | Not Available | Positive | 8007544 - 8010306 | 103655.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EHT25_31860 | Not Available | Positive | 8010362 - 8011987 | 56813.6 |
| dihydrolipoyl dehydrogenase | EHT25_31865 | Not Available | Positive | 8012114 - 8013514 | 50246.7 |
| peptidase m28 family protein | EHT25_31870 | Not Available | Positive | 8013733 - 8015097 | 49064.9 |
| hypothetical protein | EHT25_31875 | Not Available | Negative | 8015212 - 8017377 | 81674.7 |
| pyrophosphatase | EHT25_31880 | Not Available | Negative | 8017514 - 8017840 | 12357.8 |
| sigma-70 family rna polymerase sigma factor | EHT25_31885 | Not Available | Positive | 8017964 - 8018572 | 23606.6 |
| duf4974 domain-containing protein | EHT25_31890 | Not Available | Positive | 8018662 - 8019675 | 38472.5 |
| susc/raga family tonb-linked outer membrane protein | EHT25_31895 | Not Available | Positive | 8019758 - 8023267 | 128032.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
