Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_31600 | Not Available | Negative | 7945030 - 7948158 | 114097.0 |
| sigma-70 family rna polymerase sigma factor | EHT25_31605 | Not Available | Positive | 7948994 - 7949551 | 22150.9 |
| hypothetical protein | EHT25_31610 | Not Available | Negative | 7949575 - 7949847 | 10419.7 |
| cellulase | EHT25_31615 | Not Available | Positive | 7950191 - 7951969 | 65259.7 |
| hypothetical protein | EHT25_31620 | Not Available | Negative | 7952054 - 7954468 | 84904.0 |
| zinc-binding alcohol dehydrogenase family protein | EHT25_31625 | Not Available | Negative | 7954585 - 7955598 | 36734.4 |
| acyl-coa desaturase | EHT25_31630 | Not Available | Positive | 7955935 - 7957089 | 43609.4 |
| m20 family peptidase | EHT25_31635 | Not Available | Positive | 7957495 - 7958778 | 46567.6 |
| hypothetical protein | EHT25_31640 | Not Available | Positive | 7958817 - 7959959 | 42695.8 |
| hypothetical protein | EHT25_31645 | Not Available | Positive | 7960122 - 7960862 | 27544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
