Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | EHT25_31500 | Not Available | Negative | 7913074 - 7913595 | 19074.0 |
| hypothetical protein | EHT25_31505 | Not Available | Positive | 7913744 - 7915102 | 50997.9 |
| cytochrome c | EHT25_31510 | Not Available | Negative | 7915104 - 7917278 | 80323.7 |
| duf1501 domain-containing protein | EHT25_31515 | Not Available | Negative | 7917300 - 7918754 | 54174.6 |
| duf1553 domain-containing protein | EHT25_31520 | Not Available | Negative | 7918853 - 7921177 | 87714.5 |
| sugar abc transporter substrate-binding protein | EHT25_31525 | Not Available | Negative | 7921319 - 7922272 | 34376.7 |
| abc transporter permease | EHT25_31530 | Not Available | Negative | 7922298 - 7923281 | 33840.7 |
| sugar abc transporter atp-binding protein | EHT25_31535 | Not Available | Negative | 7923303 - 7924796 | 53988.2 |
| gfo/idh/moca family oxidoreductase | EHT25_31540 | Not Available | Negative | 7924997 - 7926160 | 43001.8 |
| sugar phosphate isomerase/epimerase | EHT25_31545 | Not Available | Negative | 7926303 - 7927334 | 37654.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
