Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aldolase/short-chain dehydrogenase | EHT25_31400 | Not Available | Negative | 7888412 - 7890547 | 77558.5 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EHT25_31405 | Not Available | Positive | 7890804 - 7891649 | 30935.0 |
| yhyh protein | EHT25_31410 | Not Available | Positive | 7891760 - 7892539 | 28239.9 |
| membrane-binding protein | EHT25_31415 | Not Available | Positive | 7892496 - 7893089 | 22847.2 |
| sco family protein | EHT25_31420 | Not Available | Positive | 7893031 - 7893717 | 26225.6 |
| hypothetical protein | EHT25_31425 | Not Available | Positive | 7893867 - 7896146 | 84826.5 |
| hypothetical protein | EHT25_31430 | Not Available | Positive | 7896181 - 7896573 | 15236.2 |
| sdr family nad(p)-dependent oxidoreductase | EHT25_31435 | Not Available | Positive | 7896707 - 7897393 | 24218.3 |
| glycoside hydrolase family 95 protein | EHT25_31440 | Not Available | Positive | 7897463 - 7900036 | 95421.2 |
| nuclear transport factor 2 family protein | EHT25_31445 | Not Available | Positive | 7900215 - 7900652 | 15807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
