Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT25_31190 | Not Available | Negative | 7841998 - 7843443 | 52353.2 |
| tonb-dependent receptor | EHT25_31195 | Not Available | Negative | 7843458 - 7846826 | 121145.0 |
| duf4974 domain-containing protein | EHT25_31200 | Not Available | Negative | 7846927 - 7847913 | 37358.3 |
| rna polymerase sigma-70 factor | EHT25_31205 | Not Available | Positive | 7848057 - 7848647 | 22925.4 |
| duf4249 domain-containing protein | EHT25_31210 | Not Available | Negative | 7848862 - 7850034 | 43756.6 |
| duf4249 domain-containing protein | EHT25_31215 | Not Available | Negative | 7850160 - 7851374 | 45805.5 |
| tonb-dependent receptor | EHT25_31220 | Not Available | Positive | 7851545 - 7853941 | 90207.7 |
| hypothetical protein | EHT25_31225 | Not Available | Positive | 7854308 - 7855888 | 58714.7 |
| voc family protein | EHT25_31230 | Not Available | Positive | 7856056 - 7856391 | 12205.6 |
| hypothetical protein | EHT25_31235 | Not Available | Negative | 7856567 - 7856929 | 13529.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
