Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m13 family peptidase | EHT25_30990 | Not Available | Negative | 7768620 - 7770632 | 74951.1 |
| tetr/acrr family transcriptional regulator | EHT25_30995 | Not Available | Positive | 7771156 - 7771719 | 21296.4 |
| mfs transporter | EHT25_31000 | Not Available | Positive | 7771721 - 7773181 | 53060.8 |
| hypothetical protein | EHT25_31005 | Not Available | Negative | 7773394 - 7775040 | 63019.6 |
| sigma-70 family rna polymerase sigma factor | EHT25_31010 | Not Available | Positive | 7775304 - 7775894 | 22932.5 |
| fecr family protein | EHT25_31015 | Not Available | Positive | 7776085 - 7777206 | 42589.5 |
| susc/raga family tonb-linked outer membrane protein | EHT25_31020 | Not Available | Positive | 7777384 - 7780914 | 129667.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_31025 | Not Available | Positive | 7780939 - 7782438 | 54537.1 |
| glycoside hydrolase family 97 protein | EHT25_31030 | Not Available | Positive | 7782517 - 7784511 | 75178.0 |
| hypothetical protein | EHT25_31035 | Not Available | Positive | 7784536 - 7786923 | 89769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
