Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | EHT25_30940 | Not Available | Positive | 7753686 - 7755320 | 59405.7 |
| glycoside hydrolase family 28 protein | EHT25_30945 | Not Available | Positive | 7755343 - 7756854 | 54979.6 |
| sodium transporter | EHT25_30950 | Not Available | Positive | 7756857 - 7758575 | 62798.7 |
| sdr family oxidoreductase | EHT25_30955 | Not Available | Positive | 7758608 - 7759312 | 25694.9 |
| rraa family protein | EHT25_30960 | Not Available | Positive | 7759309 - 7760016 | 26214.8 |
| hypothetical protein | EHT25_30965 | Not Available | Positive | 7760016 - 7762106 | 77260.8 |
| voc family protein | EHT25_30970 | Not Available | Positive | 7762141 - 7762536 | 15026.9 |
| zn-dependent alcohol dehydrogenase | EHT25_30975 | Not Available | Positive | 7762570 - 7763580 | 36646.3 |
| duf1080 domain-containing protein | EHT25_30980 | Not Available | Negative | 7763678 - 7764490 | 30015.3 |
| hybrid sensor histidine kinase/response regulator | EHT25_30985 | Not Available | Negative | 7764568 - 7768536 | 148782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
