Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mboat family protein | EHT25_30680 | Not Available | Negative | 7673542 - 7675038 | 56491.3 |
| hypothetical protein | EHT25_30685 | Not Available | Negative | 7675051 - 7676133 | 40968.9 |
| cpbp family intramembrane metalloprotease | EHT25_30690 | Not Available | Positive | 7676296 - 7677471 | 43790.4 |
| carboxymuconolactone decarboxylase family protein | EHT25_30695 | Not Available | Positive | 7677610 - 7678062 | 17064.2 |
| transcription initiation protein | EHT25_30700 | Not Available | Positive | 7678117 - 7678467 | 12758.3 |
| rna polymerase subunit sigma | EHT25_30705 | Not Available | Positive | 7678517 - 7679833 | 49902.5 |
| tetratricopeptide repeat protein | EHT25_30710 | Not Available | Positive | 7680084 - 7681937 | 69974.0 |
| transglutaminase domain-containing protein | EHT25_30715 | Not Available | Positive | 7681968 - 7683437 | 55135.2 |
| hypothetical protein | EHT25_30720 | Not Available | Positive | 7683486 - 7684964 | 56537.3 |
| nuclear transport factor 2 family protein | EHT25_30725 | Not Available | Negative | 7685075 - 7685515 | 16485.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
