Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | EHT25_30530 | Not Available | Negative | 7634550 - 7635515 | 36556.2 |
| aspartate aminotransferase family protein | EHT25_30535 | Not Available | Negative | 7635585 - 7636883 | 47889.0 |
| 3-hydroxyacyl-coa dehydrogenase family protein | EHT25_30540 | Not Available | Negative | 7636893 - 7637870 | 36914.3 |
| rida family protein | EHT25_30545 | Not Available | Negative | 7637885 - 7638274 | 13797.5 |
| arac family transcriptional regulator | EHT25_30550 | Not Available | Positive | 7638478 - 7639347 | 33393.4 |
| tonb-dependent receptor | EHT25_30555 | Not Available | Positive | 7639492 - 7642713 | 117475.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_30560 | Not Available | Positive | 7642728 - 7644209 | 54809.4 |
| exo-alpha-sialidase | EHT25_30565 | Not Available | Positive | 7644351 - 7645688 | 49214.9 |
| exo-alpha-sialidase | EHT25_30570 | Not Available | Positive | 7645712 - 7647064 | 50153.6 |
| hypothetical protein | EHT25_30575 | Not Available | Positive | 7647356 - 7649155 | 66666.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
