Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiha family ribosome biogenesis gtp-binding protein | EHT25_30020 | Not Available | Negative | 7501184 - 7501804 | 23833.8 |
| thioredoxin family protein | EHT25_30025 | Not Available | Positive | 7502064 - 7502561 | 17764.2 |
| dna-binding response regulator | EHT25_30030 | Not Available | Negative | 7502651 - 7503280 | 23848.1 |
| nucleotide sugar dehydrogenase | EHT25_30035 | Not Available | Negative | 7503435 - 7504727 | 48116.2 |
| ompa family protein | EHT25_30040 | Not Available | Negative | 7505047 - 7506477 | 53171.1 |
| trna guanosine(34) transglycosylase tgt | EHT25_30045 | Not Available | Negative | 7506740 - 7507870 | 42391.0 |
| glycosyltransferase | EHT25_30050 | Not Available | Positive | 7508070 - 7509224 | 43880.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EHT25_30055 | Not Available | Positive | 7509290 - 7509910 | 23446.5 |
| hypothetical protein | EHT25_30060 | Not Available | Positive | 7509945 - 7510244 | 11105.5 |
| Trna-asn | Not Available | Not Available | Positive | 7510343 - 7510416 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
