Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_29970 | Not Available | Negative | 7488260 - 7491439 | 114839.0 |
| sigma-54-dependent fis family transcriptional regulator | EHT25_29975 | Not Available | Positive | 7491838 - 7492989 | 42777.6 |
| acyl transferase | EHT25_29980 | Not Available | Negative | 7492986 - 7494101 | 42087.1 |
| hypothetical protein | EHT25_29985 | Not Available | Positive | 7494152 - 7494676 | 19697.4 |
| histidine kinase | EHT25_29990 | Not Available | Negative | 7494707 - 7495945 | 46538.4 |
| glutamyl-trna reductase | EHT25_29995 | Not Available | Positive | 7496270 - 7497583 | 48982.6 |
| duf4230 domain-containing protein | EHT25_30000 | Not Available | Positive | 7497752 - 7498369 | 23539.9 |
| had family hydrolase | EHT25_30005 | Not Available | Positive | 7498556 - 7499311 | 27483.7 |
| tigr03364 family fad-dependent oxidoreductase | EHT25_30010 | Not Available | Positive | 7499324 - 7500475 | 42947.2 |
| hypothetical protein | EHT25_30015 | Not Available | Negative | 7500610 - 7501098 | 18082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
