Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsbd | EHT25_29870 | Not Available | Positive | 7462386 - 7464545 | 78657.3 |
| tigr01777 family protein | EHT25_29875 | Not Available | Positive | 7464603 - 7465520 | 33682.7 |
| polysaccharide biosynthesis protein | EHT25_29880 | Not Available | Positive | 7465641 - 7467587 | 72834.2 |
| acetyl-coa c-acetyltransferase | EHT25_29885 | Not Available | Positive | 7467739 - 7468947 | 42441.2 |
| 3-hydroxyacyl-coa dehydrogenase | EHT25_29890 | Not Available | Positive | 7468957 - 7471119 | 78099.6 |
| m28 family peptidase | EHT25_29895 | Not Available | Positive | 7471140 - 7472636 | 53778.9 |
| port family protein | EHT25_29900 | Not Available | Negative | 7472716 - 7473333 | 22559.5 |
| dna mismatch repair protein muts | EHT25_29905 | Not Available | Negative | 7473624 - 7475219 | 60967.7 |
| tonb family protein | EHT25_29910 | Not Available | Negative | 7475241 - 7476491 | 45742.9 |
| sigma-70 family rna polymerase sigma factor | EHT25_29915 | Not Available | Negative | 7476484 - 7477062 | 22649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
