Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EHT25_29565 | Not Available | Positive | 7387444 - 7387950 | 18693.4 |
| multidrug efflux smr transporter | EHT25_29570 | Not Available | Negative | 7387974 - 7388303 | 11665.8 |
| t9ss c-terminal target domain-containing protein | EHT25_29575 | Not Available | Negative | 7388353 - 7391166 | 103869.0 |
| m20/m25/m40 family metallo-hydrolase | EHT25_29580 | Not Available | Negative | 7391299 - 7392759 | 54065.6 |
| duf58 domain-containing protein | EHT25_29585 | Not Available | Negative | 7392765 - 7394105 | 52150.9 |
| moxr family atpase | EHT25_29590 | Not Available | Negative | 7394102 - 7395076 | 36050.6 |
| duf4350 domain-containing protein | EHT25_29595 | Not Available | Negative | 7395092 - 7396276 | 45630.8 |
| duf2911 domain-containing protein | EHT25_29600 | Not Available | Positive | 7396447 - 7396983 | 19879.7 |
| m1 family peptidase | EHT25_29605 | Not Available | Positive | 7397048 - 7398964 | 73727.2 |
| hypothetical protein | EHT25_29610 | Not Available | Positive | 7399033 - 7399920 | 33390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
