Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EHT25_29465 | Not Available | Positive | 7362544 - 7363752 | 44201.2 |
| phosphoglycerate mutase | EHT25_29470 | Not Available | Positive | 7363774 - 7364283 | 18424.2 |
| hypothetical protein | EHT25_29475 | Not Available | Positive | 7364433 - 7364852 | 16126.2 |
| tonb family protein | EHT25_29480 | Not Available | Negative | 7364929 - 7365858 | 33901.9 |
| tonb family protein | EHT25_29485 | Not Available | Negative | 7365866 - 7367863 | 73839.1 |
| blai/meci/copy family transcriptional regulator | EHT25_29490 | Not Available | Negative | 7367860 - 7368231 | 14615.8 |
| cell filamentation protein fic | EHT25_29495 | Not Available | Positive | 7368432 - 7369034 | 22744.4 |
| rna polymerase sigma-70 factor | EHT25_29500 | Not Available | Positive | 7369294 - 7369869 | 22899.8 |
| fecr family protein | EHT25_29505 | Not Available | Positive | 7369978 - 7371003 | 38626.4 |
| susc/raga family tonb-linked outer membrane protein | EHT25_29510 | Not Available | Positive | 7371345 - 7374653 | 120219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
