Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l1 | EHT25_29060 | Not Available | Positive | 7269898 - 7270596 | 24940.4 |
| 50s ribosomal protein l10 | EHT25_29065 | Not Available | Positive | 7270598 - 7271134 | 19582.8 |
| 50s ribosomal protein l7/l12 | EHT25_29070 | Not Available | Positive | 7271218 - 7271598 | 12995.7 |
| dna-directed rna polymerase subunit beta | EHT25_29075 | Not Available | Positive | 7271799 - 7275662 | 144426.0 |
| dna-directed rna polymerase subunit beta' | EHT25_29080 | Not Available | Positive | 7275989 - 7280317 | 161245.0 |
| duf3467 domain-containing protein | EHT25_29085 | Not Available | Positive | 7280554 - 7280874 | 11831.2 |
| 30s ribosomal protein s12 | EHT25_29090 | Not Available | Positive | 7280996 - 7281418 | 15342.9 |
| 30s ribosomal protein s7 | EHT25_29095 | Not Available | Positive | 7281494 - 7281961 | 17628.5 |
| hypothetical protein | EHT25_29100 | Not Available | Negative | 7282013 - 7284793 | 106270.0 |
| tonb-dependent receptor | EHT25_29105 | Not Available | Positive | 7285150 - 7288215 | 110165.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
