Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | EHT25_28860 | Not Available | Negative | 7232690 - 7233160 | 17253.3 |
| glycoside hydrolase | EHT25_28865 | Not Available | Positive | 7233576 - 7235117 | 59687.7 |
| sugar phosphate isomerase/epimerase | EHT25_28870 | Not Available | Negative | 7235200 - 7236042 | 30970.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EHT25_28875 | Not Available | Negative | 7236192 - 7237433 | 47105.9 |
| hypothetical protein | EHT25_28880 | Not Available | Negative | 7237504 - 7239030 | 58250.7 |
| penicillin acylase family protein | EHT25_28885 | Not Available | Positive | 7239225 - 7241660 | 91236.1 |
| hypothetical protein | EHT25_28890 | Not Available | Positive | 7241666 - 7242013 | 12482.9 |
| omph family outer membrane protein | EHT25_28895 | Not Available | Positive | 7242104 - 7242700 | 22761.0 |
| ssra-binding protein smpb | EHT25_28900 | Not Available | Positive | 7243251 - 7243712 | 18097.0 |
| hnh endonuclease | EHT25_28905 | Not Available | Positive | 7243844 - 7244356 | 19669.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
