Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | EHT25_28760 | Not Available | Positive | 7210598 - 7213159 | 95322.7 |
| omph family outer membrane protein | EHT25_28765 | Not Available | Positive | 7213276 - 7213917 | 24325.2 |
| omph family outer membrane protein | EHT25_28770 | Not Available | Positive | 7213927 - 7214574 | 23771.6 |
| hypothetical protein | EHT25_28775 | Not Available | Positive | 7214802 - 7216436 | 61763.3 |
| lipoprotein signal peptidase | EHT25_28780 | Not Available | Negative | 7216468 - 7217226 | 28088.8 |
| proline dehydrogenase | EHT25_28785 | Not Available | Negative | 7217319 - 7218554 | 47048.7 |
| 3-deoxy-7-phosphoheptulonate synthase | EHT25_28790 | Not Available | Positive | 7218776 - 7219879 | 41049.5 |
| hypothetical protein | EHT25_28795 | Not Available | Negative | 7220028 - 7220453 | 15769.0 |
| gfo/idh/moca family oxidoreductase | EHT25_28800 | Not Available | Positive | 7220711 - 7221970 | 46358.3 |
| sugar phosphate isomerase/epimerase | EHT25_28805 | Not Available | Positive | 7221976 - 7222914 | 35018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
