Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | EHT25_28655 | Not Available | Negative | 7180297 - 7180623 | 12156.8 |
| hypothetical protein | EHT25_28660 | Not Available | Negative | 7180698 - 7181177 | 17901.5 |
| methyltransferase domain-containing protein | EHT25_28665 | Not Available | Positive | 7181298 - 7182101 | 29782.3 |
| hypothetical protein | EHT25_28670 | Not Available | Negative | 7182182 - 7183111 | 33300.8 |
| twin-arginine translocation pathway signal | EHT25_28675 | Not Available | Negative | 7183182 - 7184240 | 39693.7 |
| fasciclin domain-containing protein | EHT25_28680 | Not Available | Negative | 7184253 - 7185236 | 33940.7 |
| duf1080 domain-containing protein | EHT25_28685 | Not Available | Positive | 7185422 - 7186024 | 22515.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_28690 | Not Available | Positive | 7186388 - 7187026 | 24979.9 |
| fecr family protein | EHT25_28695 | Not Available | Positive | 7187104 - 7188177 | 40675.3 |
| susc/raga family tonb-linked outer membrane protein | EHT25_28700 | Not Available | Positive | 7188369 - 7191977 | 131119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
