Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | EHT25_28605 | Not Available | Negative | 7166652 - 7168925 | 85494.1 |
| hypothetical protein | EHT25_28610 | Not Available | Negative | 7169103 - 7169747 | 24153.4 |
| mfs transporter | EHT25_28615 | Not Available | Negative | 7170094 - 7171374 | 46213.7 |
| tlpa family protein disulfide reductase | EHT25_28620 | Not Available | Negative | 7171499 - 7172728 | 45487.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EHT25_28625 | Not Available | Positive | 7172929 - 7173855 | 34447.2 |
| hypothetical protein | EHT25_28630 | Not Available | Positive | 7173879 - 7174280 | 15446.8 |
| pasta domain-containing protein | EHT25_28635 | Not Available | Positive | 7174277 - 7176451 | 81250.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EHT25_28640 | Not Available | Positive | 7176482 - 7177936 | 53397.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EHT25_28645 | Not Available | Positive | 7178091 - 7179308 | 45214.2 |
| dmt family transporter | EHT25_28650 | Not Available | Positive | 7179407 - 7180270 | 31978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
