Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | EHT25_28455 | Not Available | Positive | 7138603 - 7139871 | 46381.7 |
| cold-shock protein | EHT25_28460 | Not Available | Positive | 7140032 - 7140226 | 7123.39 |
| peptidylprolyl isomerase | EHT25_28465 | Not Available | Negative | 7140436 - 7141017 | 21574.1 |
| port family protein | EHT25_28470 | Not Available | Positive | 7141192 - 7141875 | 25947.3 |
| deda family protein | EHT25_28475 | Not Available | Negative | 7141986 - 7142636 | 23849.1 |
| phosphosulfolactate synthase | EHT25_28480 | Not Available | Negative | 7142654 - 7143430 | 28959.8 |
| paai family thioesterase | EHT25_28485 | Not Available | Positive | 7143571 - 7144017 | 15861.2 |
| dihydrofolate reductase | EHT25_28490 | Not Available | Negative | 7144580 - 7145137 | 21182.5 |
| dihydrofolate reductase | EHT25_28495 | Not Available | Negative | 7145208 - 7145774 | 21150.7 |
| duf2200 domain-containing protein | EHT25_28500 | Not Available | Negative | 7145838 - 7146206 | 14236.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
