Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EHT25_28355 | Not Available | Negative | 7109461 - 7110837 | 49755.5 |
| phytanoyl-coa dioxygenase family protein | EHT25_28360 | Not Available | Negative | 7110862 - 7111689 | 31153.0 |
| sdr family oxidoreductase | EHT25_28365 | Not Available | Negative | 7111701 - 7112468 | 27132.6 |
| galactonate dehydratase | EHT25_28370 | Not Available | Negative | 7112509 - 7113687 | 44172.9 |
| aspartate aminotransferase family protein | EHT25_28375 | Not Available | Negative | 7113705 - 7115057 | 49636.2 |
| gfo/idh/moca family oxidoreductase | EHT25_28380 | Not Available | Negative | 7115217 - 7116443 | 45456.2 |
| gfo/idh/moca family oxidoreductase | EHT25_28385 | Not Available | Negative | 7116492 - 7117778 | 46380.1 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_28390 | Not Available | Negative | 7117803 - 7119581 | 65511.2 |
| tonb-dependent receptor | EHT25_28395 | Not Available | Negative | 7119608 - 7122781 | 113513.0 |
| gntr family transcriptional regulator | EHT25_28400 | Not Available | Negative | 7123359 - 7123997 | 24338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
