Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-galactonokinase | EHT25_02775 | Not Available | Positive | 649243 - 650241 | 36856.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EHT25_02780 | Not Available | Positive | 650253 - 650894 | 22735.7 |
| mfs transporter | EHT25_02785 | Not Available | Positive | 650894 - 652252 | 50458.4 |
| arylsulfatase | EHT25_02790 | Not Available | Positive | 652264 - 653724 | 53562.9 |
| hypothetical protein | EHT25_02795 | Not Available | Positive | 653974 - 655965 | 76855.0 |
| hypothetical protein | EHT25_02800 | Not Available | Negative | 656108 - 656287 | 6895.44 |
| hypothetical protein | EHT25_02805 | Not Available | Negative | 656685 - 657092 | 14376.3 |
| yihy/virulence factor brkb family protein | EHT25_02810 | Not Available | Positive | 657423 - 658310 | 32941.5 |
| hypothetical protein | EHT25_02815 | Not Available | Positive | 658440 - 659432 | 36789.2 |
| pkd domain containing protein | EHT25_02820 | Not Available | Positive | 659597 - 660595 | 38072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
