Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EHT25_28155 | Not Available | Positive | 7057860 - 7058486 | 24676.7 |
| fecr family protein | EHT25_28160 | Not Available | Positive | 7058672 - 7059814 | 42660.8 |
| susc/raga family tonb-linked outer membrane protein | EHT25_28165 | Not Available | Positive | 7060141 - 7063497 | 121638.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_28170 | Not Available | Positive | 7063509 - 7064987 | 53598.8 |
| fad-dependent oxidoreductase | EHT25_28175 | Not Available | Positive | 7065208 - 7066848 | 61089.7 |
| exo-alpha-sialidase | EHT25_28180 | Not Available | Positive | 7066973 - 7068085 | 41350.9 |
| hypothetical protein | EHT25_28185 | Not Available | Negative | 7068080 - 7068538 | 17446.2 |
| smp-30/gluconolactonase/lre family protein | EHT25_28190 | Not Available | Positive | 7068661 - 7069464 | 29352.6 |
| sigma-70 family rna polymerase sigma factor | EHT25_28195 | Not Available | Positive | 7069642 - 7070127 | 18433.2 |
| hypothetical protein | EHT25_28200 | Not Available | Positive | 7070136 - 7070735 | 22498.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
