Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4160 domain-containing protein | EHT25_27800 | Not Available | Positive | 6984770 - 6985000 | 9041.79 |
| duf2442 domain-containing protein | EHT25_27805 | Not Available | Positive | 6985008 - 6985265 | 9655.32 |
| radical sam protein | EHT25_27810 | Not Available | Positive | 6985270 - 6986247 | 37394.2 |
| t9ss c-terminal target domain-containing protein | EHT25_27815 | Not Available | Negative | 6986254 - 6987366 | 40993.9 |
| enoyl-coa hydratase | EHT25_27820 | Not Available | Positive | 6987489 - 6988307 | 29929.1 |
| hypothetical protein | EHT25_27825 | Not Available | Positive | 6988381 - 6988758 | 14156.8 |
| hypothetical protein | EHT25_27830 | Not Available | Negative | 6988777 - 6989235 | 16789.3 |
| xylose isomerase | EHT25_27835 | Not Available | Negative | 6989315 - 6990655 | 50168.8 |
| tigr00341 family protein | EHT25_27840 | Not Available | Negative | 6990922 - 6992316 | 51980.5 |
| sodium:proton antiporter | EHT25_27845 | Not Available | Positive | 6992402 - 6993652 | 45634.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
