Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | EHT25_27350 | Not Available | Positive | 6878305 - 6879051 | 28229.9 |
| duf2304 domain-containing protein | EHT25_27355 | Not Available | Positive | 6879032 - 6879436 | 15364.5 |
| glycosyltransferase family 2 protein | EHT25_27360 | Not Available | Positive | 6879469 - 6880542 | 40610.0 |
| hypothetical protein | EHT25_27365 | Not Available | Negative | 6880519 - 6882324 | 67885.8 |
| lipopolysaccharide heptosyltransferase family protein | EHT25_27370 | Not Available | Positive | 6882440 - 6883654 | 45837.6 |
| hypothetical protein | EHT25_27375 | Not Available | Negative | 6883657 - 6884394 | 28919.4 |
| glycine dehydrogenase (aminomethyl-transferring) | EHT25_27380 | Not Available | Positive | 6884635 - 6887523 | 105638.0 |
| tonb-dependent receptor | EHT25_27385 | Not Available | Negative | 6887609 - 6889933 | 86800.2 |
| rna polymerase sigma factor | EHT25_27390 | Not Available | Positive | 6890354 - 6890866 | 19830.7 |
| phytoene desaturase | EHT25_27395 | Not Available | Positive | 6891121 - 6892593 | 55131.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
