Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_27150 | Not Available | Positive | 6830466 - 6831917 | 52738.1 |
| susc/raga family tonb-linked outer membrane protein | EHT25_27155 | Not Available | Positive | 6832546 - 6835782 | 118874.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_27160 | Not Available | Positive | 6835805 - 6837352 | 56181.4 |
| endopeptidase la | EHT25_27165 | Not Available | Negative | 6837424 - 6839943 | 94511.4 |
| hypothetical protein | EHT25_27170 | Not Available | Negative | 6840139 - 6840567 | 16662.7 |
| rip metalloprotease rsep | EHT25_27175 | Not Available | Negative | 6840746 - 6842068 | 47999.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EHT25_27180 | Not Available | Negative | 6842321 - 6843490 | 42427.5 |
| hepn domain-containing protein | EHT25_27185 | Not Available | Negative | 6843483 - 6843878 | 14969.9 |
| nucleotidyltransferase domain-containing protein | EHT25_27190 | Not Available | Negative | 6843875 - 6844237 | 13916.9 |
| hypothetical protein | EHT25_27195 | Not Available | Negative | 6844241 - 6845743 | 57249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
