Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | EHT25_27100 | Not Available | Positive | 6815911 - 6816522 | 22445.4 |
| hypothetical protein | EHT25_27105 | Not Available | Negative | 6816523 - 6817275 | 30033.6 |
| gdp-l-fucose synthase | EHT25_27110 | Not Available | Positive | 6817579 - 6818520 | 35633.2 |
| acetyltransferase | EHT25_27115 | Not Available | Negative | 6818639 - 6819274 | 22002.7 |
| udp-2,3-diacylglucosamine diphosphatase | EHT25_27120 | Not Available | Positive | 6819389 - 6820174 | 30685.6 |
| exonuclease subunit sbcd | EHT25_27125 | Not Available | Positive | 6820252 - 6821514 | 47751.8 |
| nuclease sbccd subunit c | EHT25_27130 | Not Available | Positive | 6821486 - 6824566 | 117620.0 |
| sdr family oxidoreductase | EHT25_27135 | Not Available | Negative | 6824651 - 6825481 | 30313.4 |
| rna methyltransferase | EHT25_27140 | Not Available | Negative | 6825592 - 6826983 | 52179.7 |
| susc/raga family tonb-linked outer membrane protein | EHT25_27145 | Not Available | Positive | 6827234 - 6830443 | 116413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
