Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | EHT25_26640 | Not Available | Negative | 6718276 - 6720729 | 90512.4 |
| marr family transcriptional regulator | EHT25_26645 | Not Available | Negative | 6720858 - 6721334 | 18246.3 |
| oxidoreductase | EHT25_26650 | Not Available | Negative | 6721467 - 6722504 | 37127.8 |
| hypothetical protein | EHT25_26655 | Not Available | Positive | 6722681 - 6723343 | 24314.7 |
| peptidase s41 | EHT25_26660 | Not Available | Positive | 6723825 - 6725267 | 52571.1 |
| gamma-glutamylcyclotransferase | EHT25_26665 | Not Available | Negative | 6725339 - 6725734 | 15117.9 |
| tonb-dependent receptor | EHT25_26670 | Not Available | Positive | 6725824 - 6727299 | 55756.2 |
| sodium transporter | EHT25_26675 | Not Available | Positive | 6727452 - 6729086 | 60060.4 |
| hypothetical protein | EHT25_26680 | Not Available | Positive | 6729350 - 6729994 | 23859.7 |
| aspartate-semialdehyde dehydrogenase | EHT25_26685 | Not Available | Positive | 6730108 - 6731100 | 35986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
